Publications

Here you can view publications generated from the A2A project, along with papers about the A2A project's study sites and methods used for data analysis. Many thanks to Patrick Crill (Stockholm U.) for providing an extensive Stordalen Mire bibliography, which this list heavily leverages.

NOTE: Due to pandemic delays, papers from this project have continued to be published, although its funding has ended. While this webpage is no longer maintained, please see https://emerge-db.asc.ohio-state.edu/pages/publications for the ongoing maintained list of publications from a group of related projects including this one.

The flags below indicate papers acknowledging funding from A2A and related projects:


Overview papers APEX Lutose Finland sites Stordalen Mire

Overview papers

Bolduc, B., Hodgkins, S. B., Varner, R. K., Crill, P. M., McCalley, C. K., Chanton, J. P., Tyson, G. W., Riley, W. J., Palace, M., Duhaime, M. B., Hough, M. A., IsoGenie Project Coordinators, IsoGenie Project Team, A2A Project Team, Saleska, S. R., Sullivan, M. B., & Rich, V. I. (2020). The IsoGenie database: an interdisciplinary data management solution for ecosystems biology and environmental research. PeerJ, 8, e9467. https://doi.org/10.7717/peerj.9467
Caporaso, J. G., Lauber, C. L., Walters, W. A., Berg-Lyons, D., Huntley, J., Fierer, N., Owens, S. M., Betley, J., Fraser, L., Bauer, M., Gormley, N., Gilbert, J. A., Smith, G., & Knight, R. (2012). Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. The ISME Journal, 6(8), 1621–1624. https://doi.org/10.1038/ismej.2012.8
Cavicchioli, R., Ripple, W. J., Timmis, K. N., Azam, F., Bakken, L. R., Baylis, M., Behrenfeld, M. J., Boetius, A., Boyd, P. W., Classen, A. T., Crowther, T. W., Danovaro, R., Foreman, C. M., Huisman, J., Hutchins, D. A., Jansson, J. K., Karl, D. M., Koskella, B., Mark Welch, D. B., Martiny, J. B. H., Moran, M. A., Orphan, V. J., Reay, D. S., Remais, J. V., Rich, V. I., Singh, B. K., Stein, L. Y., Stewart, F. J., Sullivan, M. B., van Oppen, M. J. H., Weaver, S. C., Webb, E. A., & Webster, N. S. (2019). Scientists’ warning to humanity: microorganisms and climate change. Nature Reviews Microbiology, 17(9), 569–586. https://doi.org/10.1038/s41579-019-0222-5
Deng, J., Frolking, S., Bajgain, R., Cornell, C. R., Wagle, P., Xiao, X., Zhou, J., Basara, J., Steiner, J., & Li, C. (2021). Improving a biogeochemical model to simulate microbial‐mediated carbon dynamics in agricultural ecosystems. Journal of Advances in Modeling Earth Systems, 13(11), e2021MS002752. https://doi.org/10.1029/2021MS002752
Deng, J., Guo, L., Salas, W., Ingraham, P., Charrier-Klobas, J. G., Frolking, S., & Li, C. (2018). Changes in irrigation practices likely mitigate nitrous oxide emissions from California cropland. Global Biogeochemical Cycles, 32(10), 1514–1527. https://doi.org/10.1029/2018GB005961
Deng, J., Xiao, J., Ouimette, A., Zhang, Y., Sanders‐DeMott, R., Frolking, S., & Li, C. (2020). Improving a biogeochemical model to simulate surface energy, greenhouse gas fluxes, and radiative forcing for different land use types in northeastern United States. Global Biogeochemical Cycles, 34(8), e2019GB006520. https://doi.org/10.1029/2019GB006520
Herrick, C., Steele, B. G., Brentrup, J. A., Cottingham, K. L., Ducey, M. J., Lutz, D. A., Palace, M. W., Thompson, M. C., Trout‐Haney, J. V., & Weathers, K. C. (2023). lakeCoSTR : A tool to facilitate use of Landsat Collection 2 to estimate lake surface water temperatures. Ecosphere, 14(1), e4357. https://doi.org/10.1002/ecs2.4357
Hodgkins, S. B., Richardson, C. J., Dommain, R., Wang, H., Glaser, P. H., Verbeke, B., Winkler, B. R., Cobb, A. R., Rich, V. I., Missilmani, M., Flanagan, N., Ho, M., Hoyt, A. M., Harvey, C. F., Vining, S. R., Hough, M. A., Moore, T. R., Richard, P. J. H., De La Cruz, F. B., Toufaily, J., Hamdan, R., Cooper, W. T., & Chanton, J. P. (2018). Tropical peatland carbon storage linked to global latitudinal trends in peat recalcitrance. Nature Communications, 9(1), 3640. https://doi.org/10.1038/s41467-018-06050-2
Kuhn, M. A., Varner, R. K., Bastviken, D., Crill, P., MacIntyre, S., Turetsky, M., Walter Anthony, K., McGuire, A. D., & Olefeldt, D. (2021). BAWLD-CH4: a comprehensive dataset of methane fluxes from boreal and arctic ecosystems. Earth System Science Data, 13(11), 5151–5189. https://doi.org/10.5194/essd-13-5151-2021
Li, C. (2007). Quantifying greenhouse gas emissions from soils: Scientific basis and modeling approach. Soil Science and Plant Nutrition, 53(4), 344–352. https://doi.org/10.1111/j.1747-0765.2007.00133.x
Olefeldt, D., Goswami, S., Grosse, G., Hayes, D., Hugelius, G., Kuhry, P., McGuire, A. D., Romanovsky, V. E., Sannel, A. B. K., Schuur, E. A. G., & Turetsky, M. R. (2016). Circumpolar distribution and carbon storage of thermokarst landscapes. Nature Communications, 7(1), 13043. https://doi.org/10.1038/ncomms13043
Olefeldt, D., Hovemyr, M., Kuhn, M. A., Bastviken, D., Bohn, T. J., Connolly, J., Crill, P., Euskirchen, E. S., Finkelstein, S. A., Genet, H., Grosse, G., Harris, L. I., Heffernan, L., Helbig, M., Hugelius, G., Hutchins, R., Juutinen, S., Lara, M. J., Malhotra, A., Manies, K., McGuire, A. D., Natali, S. M., O’Donnell, J. A., Parmentier, F.-J. W., Räsänen, A., Schädel, C., Sonnentag, O., Strack, M., Tank, S. E., Treat, C., Varner, R. K., Virtanen, T., Warren, R. K., & Watts, J. D. (2021). The Boreal–Arctic Wetland and Lake Dataset (BAWLD). Earth System Science Data, 13(11), 5127–5149. https://doi.org/10.5194/essd-13-5127-2021
Perryman, C. R., McCalley, C. K., Ernakovich, J. G., Lamit, L. J., Shorter, J. H., Lilleskov, E., & Varner, R. K. (2022). Microtopography matters: Belowground CH4 cycling regulated by differing microbial processes in peatland hummocks and lawns. Journal of Geophysical Research: Biogeosciences, 127(8), e2022JG006948. https://doi.org/10.1029/2022JG006948
Perryman, C. R., McCalley, C. K., Shorter, J. H., Perry, A. L., White, N., Dziurzynski, A., & Varner, R. K. (2023). Effect of drought and heavy precipitation on CH4 emissions and δ13C-CH4 in a northern temperate peatland. Ecosystems. https://doi.org/10.1007/s10021-023-00868-8
Robison, A. L., Wollheim, W. M., Perryman, C. R., Cotter, A. R., Mackay, J. E., Varner, R. K., Clarizia, P., & Ernakovich, J. G. (2022). Dominance of diffusive methane emissions from lowland headwater streams promotes oxidation and isotopic enrichment. Frontiers in Environmental Science, 9, 791305. https://doi.org/10.3389/fenvs.2021.791305
Robison, A. L., Wollheim, W. M., Turek, B., Bova, C., Snay, C., & Varner, R. K. (2021). Spatial and temporal heterogeneity of methane ebullition in lowland headwater streams and the impact on sampling design. Limnology and Oceanography, 66(12), 4063–4076. https://doi.org/10.1002/lno.11943
Verbeke, B. A., Lamit, L. J., Lilleskov, E. A., Hodgkins, S. B., Basiliko, N., Kane, E. S., Andersen, R., Artz, R. R. E., Benavides, J. C., Benscoter, B. W., Borken, W., Bragazza, L., Brandt, S. M., Bräuer, S. L., Carson, M. A., Charman, D., Chen, X., Clarkson, B. R., Cobb, A. R., Convey, P., Pasquel, J. del Á., Enriquez, A. S., Griffiths, H., Grover, S. P., Harvey, C. F., Harris, L. I., Hazard, C., Hodgson, D., Hoyt, A. M., Hribljan, J., Jauhiainen, J., Juutinen, S., Knorr, K., Kolka, R. K., Könönen, M., Larmola, T., McCalley, C. K., McLaughlin, J., Moore, T. R., Mykytczuk, N., Normand, A. E., Rich, V., Roulet, N., Royles, J., Rutherford, J., Smith, D. S., Svenning, M. M., Tedersoo, L., Thu, P. Q., Trettin, C. C., Tuittila, E., Urbanová, Z., Varner, R. K., Wang, M., Wang, Z., Warren, M., Wiedermann, M. M., Williams, S., Yavitt, J. B., Yu, Z., Yu, Z., & Chanton, J. P. (2022). Latitude, elevation, and mean annual temperature predict peat organic matter chemistry at a global scale. Global Biogeochemical Cycles, 36(2), e2021GB007057. https://doi.org/10.1029/2021GB007057

APEX

Chivers, M. R., Turetsky, M. R., Waddington, J. M., Harden, J. W., & McGuire, A. D. (2009). Effects of experimental water table and temperature manipulations on ecosystem CO2 fluxes in an Alaskan rich fen. Ecosystems, 12(8), 1329–1342. https://doi.org/10.1007/s10021-009-9292-y
Ping, C. L., Michaelson, G. J., Packee, E. C., Stiles, C. A., Swanson, D. K., & Yoshikawa, K. (2005). Soil catena sequences and fire ecology in the boreal forest of Alaska. Soil Science Society of America Journal, 69(6), 1761–1772. https://doi.org/10.2136/sssaj2004.0139
Rupp, D., Kane, E. S., Dieleman, C., Keller, J. K., & Turetsky, M. (2019). Plant functional group effects on peat carbon cycling in a boreal rich fen. Biogeochemistry, 144(3), 305–327. https://doi.org/10.1007/s10533-019-00590-5
Turetsky, M. R., Treat, C. C., Waldrop, M. P., Waddington, J. M., Harden, J. W., & McGuire, A. D. (2008). Short-term response of methane fluxes and methanogen activity to water table and soil warming manipulations in an Alaskan peatland. Journal of Geophysical Research, 113, G00A10. https://doi.org/10.1029/2007JG000496

Lutose

Prater, J. L., Chanton, J. P., & Whiting, G. J. (2007). Variation in methane production pathways associated with permafrost decomposition in collapse scar bogs of Alberta, Canada. Global Biogeochemical Cycles, 21(4), GB4004. https://doi.org/10.1029/2006GB002866

Finland sites

Aurela, M., Laurila, T., & Tuovinen, J.-P. (2002). Annual CO2 balance of a subarctic fen in northern Europe: Importance of the wintertime efflux. Journal of Geophysical Research: Atmospheres, 107(D21), ACH 17-1–ACH 17-12. https://doi.org/10.1029/2002JD002055
Aurela, M., Laurila, T., & Tuovinen, J.-P. (2001). Seasonal CO2 balances of a subarctic mire. Journal of Geophysical Research: Atmospheres, 106(D2), 1623–1637. https://doi.org/10.1029/2000JD900481
Juutinen, S., Väliranta, M., Kuutti, V., Laine, A. M., Virtanen, T., Seppä, H., Weckström, J., & Tuittila, E.-S. (2013). Short-term and long-term carbon dynamics in a northern peatland-stream-lake continuum: A catchment approach. Journal of Geophysical Research: Biogeosciences, 118(1), 171–183. https://doi.org/10.1002/jgrg.20028
Maanavilja, L., Riutta, T., Aurela, M., Pulkkinen, M., Laurila, T., & Tuittila, E.-S. (2011). Spatial variation in CO2 exchange at a northern aapa mire. Biogeochemistry, 104(1–3), 325–345. https://doi.org/10.1007/s10533-010-9505-7

Stordalen Mire (& other IsoGenie-relevant studies)

2022

Burke, S. A. (2022). EMERGE Institute Field Safety & Logistics Handbook. University of New Hampshire: Earth Systems Research Center. Retrieved from https://dx.doi.org/10.34051/p/2022.05
Cory, A. B., Chanton, J. P., Spencer, R. G. M., Ogles, O. C., Rich, V. I., McCalley, C. K., IsoGenie Project Coordinators, EMERGE 2021 Field Team, & Wilson, R. M. (2022). Quantifying the inhibitory impact of soluble phenolics on anaerobic carbon mineralization in a thawing permafrost peatland. PLOS ONE, 17(2), e0252743. https://doi.org/10.1371/journal.pone.0252743
Dominguez-Huerta, G., Zayed, A. A., Wainaina, J. M., Guo, J., Tian, F., Pratama, A. A., Bolduc, B., Mohssen, M., Zablocki, O., Pelletier, E., Delage, E., Alberti, A., Aury, J.-M., Carradec, Q., da Silva, C., Labadie, K., Poulain, J., Tara Oceans Coordinators, Bowler, C., Eveillard, D., Guidi, L., Karsenti, E., Kuhn, J. H., Ogata, H., Wincker, P., Culley, A., Chaffron, S., & Sullivan, M. B. (2022). Diversity and ecological footprint of Global Ocean RNA viruses. Science, 376(6598), 1202–1208. https://doi.org/10.1126/science.abn6358
Ernakovich, J. G., Barbato, R. A., Rich, V. I., Schädel, C., Hewitt, R. E., Doherty, S. J., Whalen, E. D., Abbott, B. W., Barta, J., Biasi, C., Chabot, C. L., Hultman, J., Knoblauch, C., Vetter, M. C. Y. L., Leewis, M., Liebner, S., Mackelprang, R., Onstott, T. C., Richter, A., Schütte, U. M. E., Siljanen, H. M. P., Taş, N., Timling, I., Vishnivetskaya, T. A., Waldrop, M. P., & Winkel, M. (2022). Microbiome assembly in thawing permafrost and its feedbacks to climate. Global Change Biology, gcb.16231. https://doi.org/10.1111/gcb.16231
Fahnestock, M. F. (2022, May 1). Compound, elemental, and isotopic perspectives on mercury mobilization during thaw in a discontinuous permafrost zone (Doctoral Dissertation). University of New Hampshire, Durham, NH. Retrieved from https://scholars.unh.edu/dissertation/2669
Holmes, M. E., Crill, P. M., Burnett, W. C., McCalley, C. K., Wilson, R. M., Frolking, S., Chang, K. ‐Y., Riley, W. J., Varner, R. K., Hodgkins, S. B., IsoGenie Project Coordinators, IsoGenie Field Team, McNichol, A. P., Saleska, S. R., Rich, V. I., & Chanton, J. P. (2022). Carbon accumulation, flux, and fate in Stordalen Mire, a permafrost peatland in transition. Global Biogeochemical Cycles, 36(1). https://doi.org/10.1029/2021GB007113
Kashi, N. N., Hobbie, E. A., Varner, R. K., Wymore, A. S., Ernakovich, J. G., & Giesler, R. (2022). Nutrients alter methane production and oxidation in a thawing permafrost mire. Ecosystems. https://doi.org/10.1007/s10021-022-00758-5
Varner, R. K., Crill, P. M., Frolking, S., McCalley, C. K., Burke, S. A., Chanton, J. P., Holmes, M. E., Isogenie Project Coordinators, Saleska, S., & Palace, M. W. (2022). Permafrost thaw driven changes in hydrology and vegetation cover increase trace gas emissions and climate forcing in Stordalen Mire from 1970 to 2014. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 380(2215), 20210022. https://doi.org/10.1098/rsta.2021.0022
Verbeke, B. A., Lamit, L. J., Lilleskov, E. A., Hodgkins, S. B., Basiliko, N., Kane, E. S., Andersen, R., Artz, R. R. E., Benavides, J. C., Benscoter, B. W., Borken, W., Bragazza, L., Brandt, S. M., Bräuer, S. L., Carson, M. A., Charman, D., Chen, X., Clarkson, B. R., Cobb, A. R., Convey, P., Pasquel, J. del Á., Enriquez, A. S., Griffiths, H., Grover, S. P., Harvey, C. F., Harris, L. I., Hazard, C., Hodgson, D., Hoyt, A. M., Hribljan, J., Jauhiainen, J., Juutinen, S., Knorr, K., Kolka, R. K., Könönen, M., Larmola, T., McCalley, C. K., McLaughlin, J., Moore, T. R., Mykytczuk, N., Normand, A. E., Rich, V., Roulet, N., Royles, J., Rutherford, J., Smith, D. S., Svenning, M. M., Tedersoo, L., Thu, P. Q., Trettin, C. C., Tuittila, E., Urbanová, Z., Varner, R. K., Wang, M., Wang, Z., Warren, M., Wiedermann, M. M., Williams, S., Yavitt, J. B., Yu, Z., Yu, Z., & Chanton, J. P. (2022). Latitude, elevation, and mean annual temperature predict peat organic matter chemistry at a global scale. Global Biogeochemical Cycles, 36(2), e2021GB007057. https://doi.org/10.1029/2021GB007057
Wilson, R. M., Hough, M. A., Verbeke, B. A., Hodgkins, S. B., Chanton, J. P., Saleska, S. D., Rich, V. I., Tfaily, M. M., Tyson, G., Sullivan, M. B., Brodie, E., Riley, W. J., Woodcroft, B., McCalley, C., Dominguez, S. C., Crill, P. M., Varner, R. K., Frolking, S., & Cooper, W. T. (2022). Plant organic matter inputs exert a strong control on soil organic matter decomposition in a thawing permafrost peatland. Science of The Total Environment, 820, 152757. https://doi.org/10.1016/j.scitotenv.2021.152757

2021

Affholder, A., Guyot, F., Sauterey, B., Ferrière, R., & Mazevet, S. (2021). Bayesian analysis of Enceladus’s plume data to assess methanogenesis. Nature Astronomy, 5(8), 805–814. https://doi.org/10.1038/s41550-021-01372-6
Defrenne, C. E., Abs, E., Longhi Cordeiro, A., Dietterich, L., Hough, M., Jones, J. M., Kivlin, S. N., Chen, W., Cusack, D., Franco, A. L. C., Khasanova, A., Stover, D., & Romero‐Olivares, A. L. (2021). The Ecology Underground coalition: building a collaborative future of belowground ecology and ecologists. New Phytologist, 229(6), 3058–3064. https://doi.org/10.1111/nph.17163
Emerson, J. B., Varner, R. K., Wik, M., Parks, D. H., Neumann, R. B., Johnson, J. E., Singleton, C. M., Woodcroft, B. J., Tollerson, R., Owusu-Dommey, A., Binder, M., Freitas, N. L., Crill, P. M., Saleska, S. R., Tyson, G. W., & Rich, V. I. (2021). Diverse sediment microbiota shape methane emission temperature sensitivity in Arctic lakes. Nature Communications, 12(1), 5815. https://doi.org/10.1038/s41467-021-25983-9
Hough, M., McCabe, S., Vining, S. R., Pickering Pedersen, E., Wilson, R. M., Lawrence, R., Chang, K., Bohrer, G., The IsoGenie Coordinators, Riley, W. J., Crill, P. M., Varner, R. K., Blazewicz, S. J., Dorrepaal, E., Tfaily, M. M., Saleska, S. R., Rich, V. I., Frolking, S., Hodgkins, S. B., McCalley, C. K., Cooper, W. T., Chanton, J. P., Sullivan, M. B., Tyson, G. W., Brodie, E. L., Woodcroft, B. J., & Dominguez, S. (2021). Coupling plant litter quantity to a novel metric for litter quality explains C storage changes in a thawing permafrost peatland. Global Change Biology, gcb.15970. https://doi.org/10.1111/gcb.15970
Roux, S., Paul, B. G., Bagby, S. C., Nayfach, S., Allen, M. A., Attwood, G., Cavicchioli, R., Chistoserdova, L., Gruninger, R. J., Hallam, S. J., Hernandez, M. E., Hess, M., Liu, W.-T., McAllister, T. A., O’Malley, M. A., Peng, X., Rich, V. I., Saleska, S. R., & Eloe-Fadrosh, E. A. (2021). Ecology and molecular targets of hypermutation in the global microbiome. Nature Communications, 12(1), 3076. https://doi.org/10.1038/s41467-021-23402-7
Wilson, R. M., Zayed, A. A., Crossen, K. B., Woodcroft, B., Tfaily, M. M., Emerson, J., Raab, N., Hodgkins, S. B., Verbeke, B., Tyson, G., Crill, P., Saleska, S., Chanton, J. P., Rich, V. I., IsoGenie Project Coordinators, & IsoGenie Project Field Team. (2021). Functional capacities of microbial communities to carry out large scale geochemical processes are maintained during ex situ anaerobic incubation. PLOS ONE, 16(2), e0245857. https://doi.org/10.1371/journal.pone.0245857
Zinke, L. A., Evans, P. N., Santos‐Medellín, C., Schroeder, A. L., Parks, D. H., Varner, R. K., Rich, V. I., Tyson, G. W., & Emerson, J. B. (2021). Evidence for non‐methanogenic metabolisms in globally distributed archaeal clades basal to the Methanomassiliicoccales. Environmental Microbiology, 23(1), 340–357. https://doi.org/10.1111/1462-2920.15316

2020

AminiTabrizi, R., Wilson, R. M., Fudyma, J. D., Hodgkins, S. B., Heyman, H. M., Rich, V. I., Saleska, S. R., Chanton, J. P., & Tfaily, M. M. (2020). Controls on soil organic matter degradation and subsequent greenhouse gas emissions across a permafrost thaw gradient in northern Sweden. Frontiers in Earth Science, 8, 557961. https://doi.org/10.3389/feart.2020.557961
Bennett, K. A. (2020). Using stable isotopes to determine dominant methane production pathways of thaw ponds in a subarctic peatland (M.S.). University of New Hampshire, Durham, NH. Retrieved from https://www.proquest.com/docview/2488138640/abstract/1B76E2395E634B5CPQ/1
Bolduc, B., Hodgkins, S. B., Varner, R. K., Crill, P. M., McCalley, C. K., Chanton, J. P., Tyson, G. W., Riley, W. J., Palace, M., Duhaime, M. B., Hough, M. A., IsoGenie Project Coordinators, IsoGenie Project Team, A2A Project Team, Saleska, S. R., Sullivan, M. B., & Rich, V. I. (2020). The IsoGenie database: an interdisciplinary data management solution for ecosystems biology and environmental research. PeerJ, 8, e9467. https://doi.org/10.7717/peerj.9467
Boyd, J. A. (2020, May 25). Development of meta omic tools to explore microbial carbon cycling (PhD Thesis). The University of Queensland, Brisbane, QLD, Australia. https://doi.org/10.14264/uql.2020.747
Burke, S. (2020, May 1). Investigating the spatial and temporal scale variability of ebullitive flux from a subarctic thaw pond system (PhD Dissertation). University of New Hampshire, Durham, NH. Retrieved from https://scholars.unh.edu/dissertation/2499
Chang, K.-Y., Riley, W. J., Crill, P. M., Grant, R. F., & Saleska, S. R. (2020). Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity. Biogeosciences, 17(22), 5849–5860. https://doi.org/10.5194/bg-17-5849-2020
Cooper, W. T., Chanton, J. C., D’Andrilli, J., Hodgkins, S. B., Podgorski, D. C., Stenson, A. C., Tfaily, M. M., & Wilson, R. M. (2020). A history of molecular level analysis of natural organic matter by FTICR mass spectrometry and the paradigm shift in organic geochemistry. Mass Spectrometry Reviews, mas.21663. https://doi.org/10.1002/mas.21663
Emerson, J. B., Varner, R. K., Wik, M., Parks, D. H., Neumann, R. B., Johnson, J. E., Singleton, C. M., Woodcroft, B. J., Tollerson, R., Owusu-Dommey, A., Binder, M., Freitas, N. L., Crill, P. M., Saleska, S. R., Tyson, G. W., & Rich, V. I. (2020). Diverse Arctic lake sediment microbiota shape methane emission temperature sensitivity. BioRxiv, preprint, 2020.02.08.934661. https://doi.org/10.1101/2020.02.08.934661
Hough, M., McClure, A., Bolduc, B., Dorrepaal, E., Saleska, S., Klepac-Ceraj, V., & Rich, V. (2020). Biotic and environmental drivers of plant microbiomes across a permafrost thaw gradient. Frontiers in Microbiology, 11, 796. https://doi.org/10.3389/fmicb.2020.00796
Hough, M. A. (2020). Tracing the new carbon cycle from plant inputs to microbial outputs across an arctic permafrost thaw gradient (PhD Dissertation). University of Arizona, Tucson, AZ. Retrieved from https://repository.arizona.edu/handle/10150/641681
Perryman, C. R., McCalley, C. K., Malhotra, A., Fahnestock, M. F., Kashi, N. N., Bryce, J. G., Giesler, R., & Varner, R. K. (2020). Thaw transitions and redox conditions drive methane oxidation in a permafrost peatland. Journal of Geophysical Research: Biogeosciences, 125(3), e2019JG005526. https://doi.org/10.1029/2019JG005526
Thanh Duc, N., Silverstein, S., Wik, M., Crill, P., Bastviken, D., & Varner, R. K. (2020). Technical note: Greenhouse gas flux studies: an automated online system for gas emission measurements in aquatic environments. Hydrology and Earth System Sciences, 24(7), 3417–3430. https://doi.org/10.5194/hess-24-3417-2020
Wik, M., Thornton, B. F., Varner, R. K., McCalley, C., & Crill, P. M. (2020). Stable methane isotopologues from northern lakes suggest that ebullition is dominated by sub‐lake scale processes. Journal of Geophysical Research: Biogeosciences, 125(10). https://doi.org/10.1029/2019JG005601

2019

Abs, E., Saleska, S. R., & Ferriere, R. (2019). Microbial evolution reshapes soil carbon feedbacks to climate change. BioRxiv, preprint, 641399. https://doi.org/10.1101/641399
Boyd, J. A., Jungbluth, S. P., Leu, A. O., Evans, P. N., Woodcroft, B. J., Chadwick, G. L., Orphan, V. J., Amend, J. P., Rappé, M. S., & Tyson, G. W. (2019). Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi. The ISME Journal, 13(5), 1269–1279. https://doi.org/10.1038/s41396-018-0343-2
Burke, S. A., Wik, M., Lang, A., Contosta, A. R., Palace, M., Crill, P. M., & Varner, R. K. (2019). Long term measurements of methane ebullition from thaw ponds. Journal of Geophysical Research: Biogeosciences, 124. https://doi.org/10.1029/2018JG004786
Chang, K., Riley, W. J., Brodie, E. L., McCalley, C. K., Crill, P. M., & Grant, R. F. (2019). Methane production pathway regulated proximally by substrate availability and distally by temperature in a high‐latitude mire complex. Journal of Geophysical Research: Biogeosciences, 124(10), 3057–3074. https://doi.org/10.1029/2019JG005355
Chang, K.-Y., Riley, W. J., Crill, P. M., Grant, R. F., Rich, V. I., & Saleska, S. R. (2019). Large carbon cycle sensitivities to climate across a permafrost thaw gradient in subarctic Sweden. The Cryosphere, 13, 647–663. https://doi.org/10.5194/tc-13-647-2019
Evans, P. N., Boyd, J. A., Leu, A. O., Woodcroft, B. J., Parks, D. H., Hugenholtz, P., & Tyson, G. W. (2019). An evolving view of methane metabolism in the Archaea. Nature Reviews Microbiology, 17(4), 219–232. https://doi.org/10.1038/s41579-018-0136-7
Fahnestock, M. F., Bryce, J. G., McCalley, C. K., Montesdeoca, M., Bai, S., Li, Y., Driscoll, C. T., Crill, P. M., Rich, V. I., & Varner, R. K. (2019). Mercury reallocation in thawing subarctic peatlands. Geochemical Perspectives Letters, 11, 33–38. https://doi.org/10.7185/geochemlet.1922
Martinez, M. A., Woodcroft, B. J., Ignacio Espinoza, J. C., Zayed, A. A., Singleton, C. M., Boyd, J. A., Li, Y.-F., Purvine, S., Maughan, H., Hodgkins, S. B., Anderson, D., Sederholm, M., Temperton, B., Bolduc, B., IsoGenie Project Coordinators, Saleska, S. R., Tyson, G. W., & Rich, V. I. (2019). Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species Cryosericum septentrionale gen. nov. sp. nov., Ca. C. hinesii sp. nov., Ca. C. odellii sp. nov., Ca. C. terrychapinii sp. nov. Systematic and Applied Microbiology, 42(1), 54–66. https://doi.org/10.1016/j.syapm.2018.12.003
Priyam, A., Woodcroft, B. J., Rai, V., Moghul, I., Munagala, A., Ter, F., Chowdhary, H., Pieniak, I., Maynard, L. J., Gibbins, M. A., Moon, H., Davis-Richardson, A., Uludag, M., Watson-Haigh, N. S., Challis, R., Nakamura, H., Favreau, E., Gómez, E. A., Pluskal, T., Leonard, G., Rumpf, W., & Wurm, Y. (2019). Sequenceserver: A Modern Graphical User Interface for Custom BLAST Databases. Molecular Biology and Evolution, 36(12), 2922–2924. https://doi.org/10.1093/molbev/msz185
Roux, S., Trubl, G., Goudeau, D., Nath, N., Couradeau, E., Ahlgren, N. A., Zhan, Y., Marsan, D., Chen, F., Fuhrman, J. A., Northen, T. R., Sullivan, M. B., Rich, V. I., Malmstrom, R. R., & Eloe-Fadrosh, E. A. (2019). Optimizing de novo genome assembly from PCR-amplified metagenomes. PeerJ, 7, e6902. https://doi.org/10.7717/peerj.6902
Tfaily, M. M., Wilson, R. M., Brewer, H. M., Chu, R. K., Heyman, H. M., Hoyt, D. W., Kyle, J. E., & Purvine, S. O. (2019). Single-throughput complementary high-resolution analytical techniques for characterizing complex natural organic matter mixtures. Journal of Visualized Experiments, (143). https://doi.org/10.3791/59035
Trubl, G., Roux, S., Solonenko, N., Li, Y.-F., Bolduc, B., Rodríguez-Ramos, J., Eloe-Fadrosh, E. A., Rich, V. I., & Sullivan, M. B. (2019). Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils. PeerJ, 7, e7265. https://doi.org/10.7717/peerj.7265
Wilson, R. M., Neumann, R. B., Crossen, K. B., Raab, N. M., Hodgkins, S. B., Saleska, S. R., Bolduc, B., Woodcroft, B. J., Tyson, G. W., Chanton, J. P., & Rich, V. I. (2019). Microbial community analyses inform geochemical reaction network models for predicting pathways of greenhouse gas production. Frontiers in Earth Science, 7, 59. https://doi.org/10.3389/feart.2019.00059
Hutchins, D. A., Jansson, J. K., Remais, J. V., Rich, V. I., Singh, B. K., & Trivedi, P. (2019). Climate change microbiology — problems and perspectives. Nature Reviews Microbiology, 17(6), 391–396. https://doi.org/10.1038/s41579-019-0178-5
Jang, H. B., Bolduc, B., Zablocki, O., Kuhn, J. H., Roux, S., Adriaenssens, E. M., Brister, J. R., Kropinski, A. M., Krupovic, M., Lavigne, R., Turner, D., & Sullivan, M. B. (2019). Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks. Nature Biotechnology, 37, 632–639. https://doi.org/10.1038/s41587-019-0100-8
Jang, H. B., Bolduc, B., Zablocki, O., Kuhn, J., Roux, S., Adriaenssens, E., Brister, J. R., Kropinski, A., Krupovic, M., Turner, D., & Sullivan, M. (2019). Gene sharing networks to automate genome-based prokaryotic viral taxonomy. BioRxiv, preprint. https://doi.org/10.1101/533240
Jansen, J., Thornton, B. F., Cortes, A., Snöälv, J., Wik, M., MacIntyre, S., & Crill, P. M. (2019). Drivers of diffusive lake CH4 emissions on daily to multi-year time scales. Biogeosciences Discussions. https://doi.org/10.5194/bg-2019-322
Jansen, J., Thornton, B. F., Jammet, M. M., Wik, M., Cortés, A., Friborg, T., MacIntyre, S., & Crill, P. M. (2019). Climate‐sensitive controls on large spring emissions of CH4 and CO2 from northern lakes. Journal of Geophysical Research: Biogeosciences, 124(7), 2379–2399. https://doi.org/10.1029/2019JG005094
Smith, G. J., & Wrighton, K. C. (2019). Metagenomic approaches unearth methanotroph phylogenetic and metabolic diversity. In L. Chistoserdova (Ed.), Methylotrophs and Methylotroph Communities (Vol. 33, pp. 57–84). Caister Academic Press. https://doi.org/10.21775/9781912530045.03

2018

Palace, M., Herrick, C., DelGreco, J., Finnell, D., Garnello, A., McCalley, C., McArthur, K., Sullivan, F., & Varner, R. (2018). Determining subarctic peatland vegetation using an unmanned aerial system (UAS). Remote Sensing, 10(9), 1498. https://doi.org/10.3390/rs10091498
Boyd, J. A., Woodcroft, B. J., & Tyson, G. W. (2018). GraftM: a tool for scalable, phylogenetically informed classification of genes within metagenomes. Nucleic Acids Research, 46(10), e59. https://doi.org/10.1093/nar/gky174
Emerson, J. B., Roux, S., Brum, J. R., Bolduc, B., Woodcroft, B. J., Jang, H. B., Singleton, C. M., Solden, L. M., Naas, A. E., Boyd, J. A., Hodgkins, S. B., Wilson, R. M., Trubl, G., Li, C., Frolking, S., Pope, P. B., Wrighton, K. C., Crill, P. M., Chanton, J. P., Saleska, S. R., Tyson, G. W., Rich, V. I., & Sullivan, M. B. (2018). Host-linked soil viral ecology along a permafrost thaw gradient. Nature Microbiology, 3(8), 870–880. https://doi.org/10.1038/s41564-018-0190-y
Singleton, C. M., McCalley, C. K., Woodcroft, B. J., Boyd, J. A., Evans, P. N., Hodgkins, S. B., Chanton, J. P., Frolking, S., Crill, P. M., Saleska, S. R., Rich, V. I., & Tyson, G. W. (2018). Methanotrophy across a natural permafrost thaw environment. The ISME Journal, 12, 2544–2558. https://doi.org/10.1038/s41396-018-0065-5
Trubl, G., Jang, H. B., Roux, S., Emerson, J. B., Solonenko, N., Vik, D. R., Solden, L., Ellenbogen, J., Runyon, A. T., Bolduc, B., Woodcroft, B. J., Saleska, S. R., Tyson, G. W., Wrighton, K. C., Sullivan, M. B., & Rich, V. I. (2018). Soil viruses are underexplored players in ecosystem carbon processing. mSystems, 3(5), e00076-18. https://doi.org/10.1128/mSystems.00076-18
Walter Anthony, K., Schneider von Deimling, T., Nitze, I., Frolking, S., Emond, A., Daanen, R., Anthony, P., Lindgren, P., Jones, B., & Grosse, G. (2018). 21st-century modeled permafrost carbon emissions accelerated by abrupt thaw beneath lakes. Nature Communications, 9(1), 3262. https://doi.org/10.1038/s41467-018-05738-9
Wik, M., Johnson, J. E., Crill, P. M., DeStasio, J. P., Erickson, L., Halloran, M. J., Fahnestock, M. F., Crawford, M. K., Phillips, S. C., & Varner, R. K. (2018). Sediment characteristics and methane ebullition in three subarctic lakes. Journal of Geophysical Research: Biogeosciences, 123(8), 2399–2411. https://doi.org/10.1029/2017JG004298
Wilson, R. M., & Tfaily, M. M. (2018). Advanced molecular techniques provide new rigorous tools for characterizing organic matter quality in complex systems. Journal of Geophysical Research: Biogeosciences, 123(6), 1790–1795. https://doi.org/10.1029/2018JG004525
Woodcroft, B. J., Singleton, C. M., Boyd, J. A., Evans, P. N., Emerson, J. B., Zayed, A. A. F., Hoelzle, R. D., Lamberton, T. O., McCalley, C. K., Hodgkins, S. B., Wilson, R. M., Purvine, S. O., Nicora, C. D., Li, C., Frolking, S., Chanton, J. P., Crill, P. M., Saleska, S. R., Rich, V. I., & Tyson, G. W. (2018). Genome-centric view of carbon processing in thawing permafrost. Nature, 560(7716), 49–54. https://doi.org/10.1038/s41586-018-0338-1
Gålfalk, M., M. Karlson, P. Crill, P. Bousquet and D. Bastviken (2018). Technical note: A simple approach for efficient collection of field reference data for calibrating remote sensing mapping of northern wetlands. Biogeosciences. doi: 10.5194/bg-2017-445. https://doi.org/10.5194/bg-2017-445
Kuhn, M., Lundin, E. J., Giesler, R., Johansson, M., & Karlsson, J. (2018). Emissions from thaw ponds largely offset the carbon sink of northern permafrost wetlands. Scientific Reports, 8(1), 9535. https://doi.org/10.1038/s41598-018-27770-x
Malhotra, A., Moore, T. R., Limpens, J., & Roulet, N. T. (2018). Post-thaw variability in litter decomposition best explained by microtopography at an ice-rich permafrost peatland. Arctic, Antarctic, and Alpine Research, 50(1), e1415622. https://doi.org/10.1080/15230430.2017.1415622
Mzobe, P., Berggren, M., Pilesjö, P., Lundin, E., Olefeldt, D., Roulet, N. T., & Persson, A. (2018). Dissolved organic carbon in streams within a subarctic catchment analysed using a GIS/remote sensing approach. PLoS ONE, 13(7), e0199608. https://doi.org/10.1371/journal.pone.0199608

2017

Bolduc, B., Youens-Clark, K., Roux, S., Hurwitz, B. L., & Sullivan, M. B. (2017). iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure. The ISME Journal, 11(1), 7–14. https://doi.org/10.1038/ismej.2016.89
Bolduc, B., Jang, H. B., Doulcier, G., You, Z.-Q., Roux, S., & Sullivan, M. B. (2017). vConTACT: an iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria. PeerJ, 5, e3243. https://doi.org/10.7717/peerj.3243
Deng, J., McCalley, C. K., Frolking, S., Chanton, J., Crill, P., Varner, R., Tyson, G., Rich, V., Hines, M., Saleska, S. R., & Li, C. (2017). Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling. Journal of Advances in Modeling Earth Systems, 9(2), 1412–1430. https://doi.org/10.1002/2016MS000817
Garnello, A. J. (2017). Establishing the role of digital repeat photography in understanding phenology and carbon cycling in a subarctic peatland (Master’s thesis). University of Arizona, Tucson, AZ. Retrieved from http://repository.arizona.edu/handle/10150/624140
Martinez-Hernandez, F., Fornas, O., Lluesma Gomez, M., Bolduc, B., de la Cruz Peña, M. J., Martínez, J. M., Anton, J., Gasol, J. M., Rosselli, R., Rodriguez-Valera, F., Sullivan, M. B., Acinas, S. G., & Martinez-Garcia, M. (2017). Single-virus genomics reveals hidden cosmopolitan and abundant viruses. Nature Communications, 8(1), 15892. https://doi.org/10.1038/ncomms15892
Mondav, R., McCalley, C. K., Hodgkins, S. B., Frolking, S., Saleska, S. R., Rich, V. I., Chanton, J. P., & Crill, P. M. (2017). Microbial network, phylogenetic diversity and community membership in the active layer across a permafrost thaw gradient. Environmental Microbiology, 19(8), 3201–3218. https://doi.org/10.1111/1462-2920.13809
Parks, D. H., Rinke, C., Chuvochina, M., Chaumeil, P.-A., Woodcroft, B. J., Evans, P. N., Hugenholtz, P., & Tyson, G. W. (2017). Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life. Nature Microbiology, 2(11), 1533–1542. https://doi.org/10.1038/s41564-017-0012-7
Roux, S., Emerson, J. B., Eloe-Fadrosh, E. A., & Sullivan, M. B. (2017). Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity. PeerJ, 5, e3817. https://doi.org/10.7717/peerj.3817
Vining, S. R. (2017). Shifts in Arctic vegetation may fuel feedbacks to climate change in peatland regions (Honors Thesis). The University of Arizona, Tucson, AZ. Retrieved from http://hdl.handle.net/10150/625232
Wilson, R. M., Fitzhugh, L., Whiting, G. J., Frolking, S., Harrison, M. D., Dimova, N., Burnett, W. C., & Chanton, J. P. (2017). Greenhouse gas balance over thaw-freeze cycles in discontinuous zone permafrost. Journal of Geophysical Research: Biogeosciences, 122(2), 387–404. https://doi.org/10.1002/2016JG003600
Wilson, Rachel M., Tfaily, M. M., Rich, V. I., Keller, J. K., Bridgham, S. D., Zalman, C. M., Meredith, L., Hanson, P. J., Hines, M., Pfeifer-Meister, L., Saleska, S. R., Crill, P., Cooper, W. T., Chanton, J. P., & Kostka, J. E. (2017). Hydrogenation of organic matter as a terminal electron sink sustains high CO2:CH4 production ratios during anaerobic decomposition. Organic Geochemistry, 112, 22–32. https://doi.org/10.1016/j.orggeochem.2017.06.011
Fisher, R.E., J.L. France, D. Lowry, M. Lanoisellé, R. Brownlow, J.A. Pyle, M. Cain, N. Warwick, U.M. Skiba, J. Drewer, K.J. Dinsmore, S.R. Leeson, S. J.-B. Bauguitte, A. Wellpott, S.J. O’Shea, G. Allen, M.W. Gallagher, J. Pitt, C.J. Percival, K. Bower, C. George, G.D. Hayman, T. Aalto, A. Lohila, M. Aurela, T. Laurila, P.M. Crill, C.K. McCalley and E.G. Nisbet (2017). Measurement of the 13C isotopic signature of methane emissions from northern European wetlands. Global Biogeochemical Cycles, 31, https://doi.org/10.1002/2016GB005504
Gałka, M., Szal, M., Watson, E. J., Gallego-Sala, A., Amesbury, M. J., Charman, D. J., Roland, T. P., Edward Turner, T., and Swindles, G. T. (2017) Vegetation Succession, Carbon Accumulation and Hydrological Change in Subarctic Peatlands, Abisko, Northern Sweden. Permafrost and Periglac. Process., https://doi.org/10.1002/ppp.1945
Howard-Varona, C., Roux, S., Dore, H., Solonenko, N. E., Holmfeldt, K., Markillie, L. M., Orr, G., & Sullivan, M. B. (2017). Regulation of infection efficiency in a globally abundant marine Bacteriodetes virus. The ISME Journal, 11(1), 284–295. https://doi.org/10.1038/ismej.2016.81
Jammet, M., S. Dengel, E. Kettner, F-J W. Parmentier, M. Wik, P. Crill, and T. Friborg (2017). Year-round CH4 and CO2 flux dynamics in two contrasting freshwater ecosystems of the subarctic. Biogeosciences, https://doi.org/10.5194/bg-14-5189-2017
Keuper, F., E. Dorrepaal, P.M. van Bodegom, R. van Logtestijn, G. Venhuizen, J. van Hal and R. Aerts (2017). Experimentally increased nutrient availability at the permafrost thaw front selectively enhances biomass production of deep-rooting subarctic peatland species. Global Change Biology: https://doi.org/10.1111/gcb.13804
Krüger, J. P., Conen, F., Leifeld, J., and Alewell, C. (2017) Palsa Uplift Identified by Stable Isotope Depth Profiles and Relation of δ15N to C/N Ratio. Permafrost and Periglac. Process., 28: 485–492. https://doi.org/10.1002/ppp.1936
Normand, A. E., A. N. Smith, M. W. Clark, J. R. Long, and K. R. Reddy (2017). Chemical Composition of Soil Organic Matter in a Subarctic Peatland: Influence of Shifting Vegetation Communities. Soil Sci. Soc. Am. J. 81:41-49. https://doi.org/10.2136/sssaj2016.05.0148
Saunois, M, P. Bousquet, and others (2017). Variability and quasi-decadal changes in the methane budget over the period 2000-2012. Atmos. Phys. Chem. 17: 11135-11161 doi:10.5194/acp-2017-296. https://doi.org/10.5194/acp-2017-296

2016

Anthony, K. W., Daanen, R., Anthony, P., Schneider von Deimling, T., Ping, C.-L., Chanton, J. P., & Grosse, G. (2016). Methane emissions proportional to permafrost carbon thawed in Arctic lakes since the 1950s. Nature Geoscience, 9(9), 679–682. https://doi.org/10.1038/ngeo2795
Hodgkins, S. B. (2016). Changes in organic matter chemistry and methanogenesis due to permafrost thaw in a subarctic peatland (Dissertation). The Florida State University, Tallahassee, FL. Retrieved from http://purl.flvc.org/fsu/fd/FSU_2016SP_Hodgkins_fsu_0071E_13057
Hodgkins, S. B., Tfaily, M. M., Podgorski, D. C., McCalley, C. K., Saleska, S. R., Crill, P. M., Rich, V. I., Chanton, J. P., & Cooper, W. T. (2016). Elemental composition and optical properties reveal changes in dissolved organic matter along a permafrost thaw chronosequence in a subarctic peatland. Geochimica et Cosmochimica Acta, 187, 123–140. https://doi.org/10.1016/j.gca.2016.05.015
Mackelprang, R., Saleska, S. R., Jacobsen, C. S., Jansson, J. K., & Taş, N. (2016). Permafrost meta-omics and climate change. Annual Review of Earth and Planetary Sciences, 44(1), 439–462. https://doi.org/10.1146/annurev-earth-060614-105126
Rinke, C., Low, S., Woodcroft, B. J., Raina, J.-B., Skarshewski, A., Le, X. H., Butler, M. K., Stocker, R., Seymour, J., Tyson, G. W., & Hugenholtz, P. (2016). Validation of picogram- and femtogram-input DNA libraries for microscale metagenomics. PeerJ, 4, e2486. https://doi.org/10.7717/peerj.2486
Trubl, G., Solonenko, N., Chittick, L., Solonenko, S. A., Rich, V. I., & Sullivan, M. B. (2016). Optimization of viral resuspension methods for carbon-rich soils along a permafrost thaw gradient. PeerJ, 4, e1999. https://doi.org/10.7717/peerj.1999
Woodcroft, B. J., Boyd, J. A., & Tyson, G. W. (2016). OrfM: a fast open reading frame predictor for metagenomic data. Bioinformatics, 32(17), 2702–2703. https://doi.org/10.1093/bioinformatics/btw241
Douglas, P. M. J., D.A.Stolper, K.M. Walter Anthony, C. Paull, S. Dallimore, M. Wik., P.M. Crill, M. Winterdahl, D.A.Smith, A.L. Sessions and J.E. Eiler (2016). Diverse origins of Arctic and Subarctic methane point source emissions identified with multiply-substituted isotopologues. Geochm. Cosmochim. Acta, https://doi.org/10.1016/j.gca.2016.05.031
Kokfelt, U., R. Muscheler, A. Mellström, E. Struyf, M. Rundgren, S. Wastegård and D. Hammarlund (2016). Diatom blooms and associated vegetation shifts in a subarctic peatland: responses to distant volcanic eruptions? J. Quaternary Science. 31, https://doi.org/10.1002/jqs.2898
Lundin, E. J., J. Klaminder, R. Giesler, A. Persson, D. Olefeldt, M. Heliasz, T. R. Christensen, and J. Karlsson (2016), Is the subarctic landscape still a carbon sink? Evidence from a detailed catchment balance. Geophys. Res. Lett., 43, 1988–1995. https://doi.org/10.1002/2015GL066970
Paez-Espino, D., Chen, I.-M. A., Palaniappan, K., Ratner, A., Chu, K., Szeto, E., Pillay, M., Huang, J., Markowitz, V. M., Nielsen, T., Huntemann, M., K. Reddy, T. B., Pavlopoulos, G. A., Sullivan, M. B., Campbell, B. J., Chen, F., McMahon, K., Hallam, S. J., Denef, V., Cavicchioli, R., Caffrey, S. M., Streit, W. R., Webster, J., Handley, K. M., Salekdeh, G. H., Tsesmetzis, N., Setubal, J. C., Pope, P. B., Liu, W.-T., Rivers, A. R., Ivanova, N. N., & Kyrpides, N. C. (2017). IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses. Nucleic Acids Research, 45(D1), D457–D465. https://doi.org/10.1093/nar/gkw1030
Pirk, N., M. Mastepanov, F.-J. W. Parmentier, M. Lund, P. Crill and T. R. Christensen (2016). Calculations of automatic chamber flux measurements of methane and carbon dioxide using short time series of concentrations. Biogeosciences, 13: 903-912. https://doi.org/10.5194/bg-13-903-2016
Stiegler, C., M. Johansson, T.R. Christensen, M. Mastepanov and A.Lindroth (2016). Tundra permafrost thaw causes significant shifts in energy partitioning. Tellus B: Chemical and Physical Meteorology, 68:1, 30467. https://doi.org/10.3402/tellusb.v68.30467
Thornton B.F., Wik M., and Crill P.M. (2016). Double-counting: a challenge to the accuracy of high-latitude methane inventories. Geophys. Res. Letts.,43:12569-12577. https://doi.org/10.1002/2016GL071772
Wik, M., Thornton, B.F., Bastviken, D., Uhlbäck, J., Crill, P.M. (2016). Biased sampling of methane release from northern lakes: a problem for extrapolation. Geophys. Res. Letts. 43, 1256-1262. https://doi.org/10.1002/2015GL066501
Wik M., Varner R.K., Walter-Anthony K., MacIntyre S., and Bastviken D. (2016): Climate-sensitive northern lakes and ponds are critical components of methane release. Nature Geoscience, 9:99-105. https://doi.org/10.1038/ngeo2578

2015

Deng, J., Li, C., & Frolking, S. (2015). Modeling impacts of changes in temperature and water table on C gas fluxes in an Alaskan peatland: Modeling C Gas Fluxes in Peatland. Journal of Geophysical Research: Biogeosciences, 120(7), 1279–1295. https://doi.org/10.1002/2014JG002880
Hodgkins, S. B., Chanton, J. P., Langford, L. C., McCalley, C. K., Saleska, S. R., Rich, V. I., Crill, P. M., & Cooper, W. T. (2015). Soil incubations reproduce field methane dynamics in a subarctic wetland. Biogeochemistry, 126(1), 241–249. https://doi.org/10.1007/s10533-015-0142-z
Kao-Kniffin, J., Woodcroft, B. J., Carver, S. M., Bockheim, J. G., Handelsman, J., Tyson, G. W., Hinkel, K. M., & Mueller, C. W. (2015). Archaeal and bacterial communities across a chronosequence of drained lake basins in arctic alaska. Scientific Reports, 5(1), 18165. https://doi.org/10.1038/srep18165
Tfaily, M. M., Corbett, J. E., Wilson, R., Chanton, J. P., Glaser, P. H., Cawley, K. M., Jaffé, R., & Cooper, W. T. (2015). Utilization of PARAFAC-modeled excitation-emission matrix (EEM) fluorescence spectroscopy to identify biogeochemical processing of dissolved organic matter in a Northern peatland. Photochemistry and Photobiology, 91(3), 684–695. https://doi.org/10.1111/php.12448
Jammet, M., P. Crill, S. Dengel and T. Friborg (2015). Large methane emissions from a subarctic lake during spring thaw: mechanisms and landscape significance. J. Geophys. Res. Biogeosci., 120,2289-2305. https://doi.org/10.1002/2015JG003137
Malhotra A. and Roulet N. (2015): Environmental correlates of peatland carbon fluxes in a thawing landscape: do transitional thaw stages matter? Biogeosciences, 12:3119-3130. https://doi.org/10.5194/bg-12-3119-2015
Tang J., Miller P.A., Crill P.M., Olin S., and Pilesjö P. (2015): Investigating the influence of two different flow routing algorithms on soil-water-vegetation interactions using the dynamic ecosystem model LPJ-GUESS. Ecohydrology, 8:568-581. https://doi.org/10.1002/eco.1526
Tang J., Miller P.A., Crill P.M., Olin S., and Pilesjö P. (2015): Investigating the influence of two different flow routing algorithms on soil-water-vegetation interactions using the dynamic ecosystem model LPJ-GUESS. Ecohydrology, 8(4): 570-583. https://doi.org/10.1002/eco.1526
Tang, J., P. A. Miller, A. Persson, D. Olefeldt, P. Pilesjö, M. Heliasz, M. Jackowicz-Korczynski, Z. Yang, B. Smith, T. V. Callaghan and T. R. Christensen (2015). Carbon budget estimation of a subarctic catchment using a dynamic ecosystem model at high spatial resolution. Biogeosciences, 12, 2791-2808. https://doi.org/10.5194/bg-12-2791-2015
Thornton, B.F., M. Wik and P.M. Crill (2015) Climate-forced changes in available energy and methane bubbling from subarctic lakes. Geophys. Res. Letts. 42: 1936-1942. https://doi.org/10.1002/2015GL063189
Waddington, J. M., Morris, P. J., Kettridge, N., Granath, G., Thompson, D. K., & Moore, P. A. (2015). Hydrological feedbacks in northern peatlands. Ecohydrology, 8(1), 113–127. https://doi.org/10.1002/eco.1493

2014

Anthony, K. M. W., Zimov, S. A., Grosse, G., Jones, M. C., Anthony, P. M., Iii, F. S. C., Finlay, J. C., Mack, M. C., Davydov, S., Frenzel, P., & Frolking, S. (2014). A shift of thermokarst lakes from carbon sources to sinks during the Holocene epoch. Nature, 511(7510), 452–456. https://doi.org/10.1038/nature13560
Deng, J., Li, C., Frolking, S., Zhang, Y., Bäckstrand, K., & Crill, P. (2014). Assessing effects of permafrost thaw on C fluxes based on multiyear modeling across a permafrost thaw gradient at Stordalen, Sweden. Biogeosciences, 11(17), 4753–4770. https://doi.org/10.5194/bg-11-4753-2014
Frolking, S., Talbot, J., & Subin, Z. M. (2014). Exploring the relationship between peatland net carbon balance and apparent carbon accumulation rate at century to millennial time scales. The Holocene, 24(9), 1167–1173. https://doi.org/10.1177/0959683614538078
Hodgkins, S. B., Tfaily, M. M., McCalley, C. K., Logan, T. A., Crill, P. M., Saleska, S. R., Rich, V. I., & Chanton, J. P. (2014). Changes in peat chemistry associated with permafrost thaw increase greenhouse gas production. Proceedings of the National Academy of Sciences of the United States of America, 111(16), 5819–5824. https://doi.org/10.1073/pnas.1314641111
McCalley, C. K., Woodcroft, B. J., Hodgkins, S. B., Wehr, R. A., Kim, E.-H., Mondav, R., Crill, P. M., Chanton, J. P., Rich, V. I., Tyson, G. W., & Saleska, S. R. (2014). Methane dynamics regulated by microbial community response to permafrost thaw. Nature, 514(7523), 478–481. https://doi.org/10.1038/nature13798
Mondav, R., Woodcroft, B. J., Kim, E.-H., McCalley, C. K., Hodgkins, S. B., Crill, P. M., Chanton, J., Hurst, G. B., VerBerkmoes, N. C., Saleska, S. R., Hugenholtz, P., Rich, V. I., & Tyson, G. W. (2014). Discovery of a novel methanogen prevalent in thawing permafrost. Nature Communications, 5, 3212. https://doi.org/10.1038/ncomms4212
Krüger J.P., Leifeld J., and Alewell, C. (2014): Degradation changes stable carbon isotope depth profiles in palsa peatlands. Biogeosciences, 11:3369-3380. https://doi.org/10.5194/bg-11-3369-2014
Turetsky, M.R., A.Kotowska, J. Bubier, N.B. Dise, P.M. Crill, E. Hornibrook, K. Minkinnen, T.R. Moore, I.H. Myers-Smith, H. Nykänen, D.Olefeldt, J. Rinne, S. Saarnio, N. Shurpali, J.M. Waddington, J. White, K. Wickland, M. Wilmking (2014). A synthesis of methane emissions from 71 northern, temperate, and 1 subtropical wetlands. Global Change Biology. https://doi.org/10.1111/gcb.12580
Wik, M., Thornton, B.F., Bastviken, D., MacIntyre, S., Varner, R.K., Crill, P.M. 2014. Energy input is primary controller of methane bubbling in subarctic lakes. Geophysical Research Letters 41. https://doi.org/10.1002/2013GL058510
Zhu Q., Liu J., Peng C., Chen H., Fang X., Jiang H., Yang G., Zhu D., Wang W., and Zhou X. (2014): Modelling methane emissions from natural wetlands: TRIPLEX-GHG model integration, sensitivity analysis, and calibration. Geoscientific Model Development, 7:981-999. https://doi.org/10.5194/gmd-7-981-2014

2013

Berg, A., Å. Danielsson and B.H. Svensson. (2013). Transfer of fixed-N from N2-fixing cyanobacteria associated with the moss Sphagnum riparium results in enhanced growth of the moss. Plant Soil, 362:271–278. https://doi.org/10.1007/s11104-012-1278-4
Dengel S., Zona D., Sachs T., Aurela M., Jammet M., Parmentier F.J.W., Oechel W., and Vesala T. (2013): Testing the applicability of neural networks as a gap-filling method using CH4 flux data from high latitude wetlands. Biogeosciences, 10:8185-8200. https://doi.org/10.5194/bg-10-8185-2013
Horst, A., Thornton, B.F., Holmstrand, H., Andersson, P., Crill, P.M. & Gustafsson, Ö. 2014. Stable bromine isotopic composition of atmospheric CH3Br. Tellus B 2013, 65, 21040. https://doi.org/10.3402/tellusb.v65i0.21040
Mortazavi B., Wilson B.J., Dong F., Gupta M., and Baer D. (2013): Validation and application of cavity-enhanced, near-infrared tunable diode laser absorption spectrometry for measurements of methane carbon isotopes at ambient concentrations. Environmental Science and Technology, 47(20):11676-11684. https://doi.org/10.1021/es402322x
Olefeldt D., Turetsky M.R., Crill P.M., and McGuire A.D. (2013): Environmental and physical controls on northern terrestrial methane emissions across permafrost zones. Global Change Biology, 19:589-603. https://doi.org/10.1111/gcb.12071
Wik, M., Crill, P.M., Varner, R.K. & Bastviken, D. (2013). Multiyear measurements of ebullitive methane flux from three subarctic lakes. Journal of Geophysical Research: Biogeosciences 118: 1307-1321. https://doi.org/10.1002/jgrg.20103

2012

Tfaily, M. M., Hodgkins, S., Podgorski, D. C., Chanton, J. P., & Cooper, W. T. (2012). Comparison of dialysis and solid-phase extraction for isolation and concentration of dissolved organic matter prior to Fourier transform ion cyclotron resonance mass spectrometry. Analytical and Bioanalytical Chemistry, 404(2), 447–457. https://doi.org/10.1007/s00216-012-6120-6
Christensen, T.R., Jackowicz-Korczynski, M., Aurela, M., Crill, P., Heliasz, M., Mastepanov, M. & Friborg, T. (2012). Monitoring the Multi-Year Carbon Balance of a Subarctic Palsa Mire with Micrometeorological Techniques. AMBIO 41 (Supplementum 3): 207-217. https://doi.org/10.1007/s13280-012-0302-5
Hasan A., Pilesjö P., and Persson A. (2012): On generating digital elevation models from liDAR data-resolution versus accuracy and topographic wetness index indices in northern peatlands. Geodesy and Cartography, 38(2):57-69. https://doi.org/10.3846/20296991.2012.702983
Jonasson, C., Sonesson, M., Christensen, T. R., & Callaghan, T. V. (2012). Environmental monitoring and research in the Abisko area—an overview. AMBIO, 41(S3), 178–186. https://doi.org/10.1007/s13280-012-0301-6
Lupascu M., Wadham J.L., Hornibrook E.R.C., and Pancost R.D. (2012): Temperature sensitivity of methane production in the permafrost active layer at Stordalen, Sweden: A comparison with non-permafrost northern wetlands. Arctic, Antarctic, and Alpine Research, 44:469-482. https://doi.org/10.1657/1938-4246-44.4.469
Olefeldt, D., & Roulet, N. T. (2012). Effects of permafrost and hydrology on the composition and transport of dissolved organic carbon in a subarctic peatland complex. Journal of Geophysical Research: Biogeosciences, 117(G1), G01005. https://doi.org/10.1029/2011JG001819
Olefeldt, D., Roulet, N.T., Bergeron, O., Crill, P., Bäckstrand, K. & Christensen, T.R. (2012). Net carbon accumulation of a high-latitude permafrost palsa mire similar to permafrost-free peatlands. Geophysical Research Letters 39, L03501. https://doi.org/10.1029/2011GL050355
Olefeldt, D., Roulet, N.T., Giesler, R. & Persson, A. (2012). Total waterborne carbon export and DOC composition from ten nested subarctic peatland catchments - importance of peatland cover, groundwater influence, and inter-annual variability of precipitation patterns. Hydrological Processes. https://doi.org/10.1002/hyp.9358
Torbick, N., A. Persson, D. Olefeldt, S. Frolking, W. Salas, S. Hagen, P. Crill and C. Li (2012). High Resolution Mapping of Peatland Hydroperiod at a High-Latitude Swedish Mire. Remote Sens, 4., 1974-1992. https://doi.org/10.3390/rs4071974

2011

Bastviken, D., L.J. Tranvik, J.A. Downing, P.M. Crill and A. Enrich-Prast (2011). Freshwater methane emissions offset the continental carbon sink. Science, 311: 50. • Online
Wik, M., Crill, P.M., Bastviken, D., Danielsson, Å. & Norbäck, E. 2011. Bubbles trapped in arctic lake ice: Potential inplications for methane emissions. Journal of Geophysical Research, Vol.116, G03044, doi:10.1029/2011JG001761 • Online

2010

Bäckstrand, K., P.M. Crill, M. Jackowicz-Korczynski, M. Mastepanov, T.R. Christensen and D. Bastviken. 2010. Annual carbon gas budget for a subarctic peatland, Northern Sweden. Biogeosciences, 7, 95-108. • Online
Callaghan, T. V., Bergholm, F., Christensen, T. R., Jonasson, C., Kokfelt, U., & Johansson, M. (2010). A new climate era in the sub-Arctic: Accelerating climate changes and multiple impacts. Geophysical Research Letters, 37(14), L14705. • Online
Faubert, P., Tiiva, P., Rinnan, Å., Michelsen, A., Holopainen, J.K. & Rinnan, R. 2010. Doubled volatile organic compound emissions from subarctic tundra under simulated climate warming. New Phytologist 187: 199-208. http://dx.doi.org/10.1111/j.1469-8137.2010.03270.x • Online
Gavazov, K.S., N.A. Soudzilovskaia, R. S. P. van Logtestijn, M. Braster and J. H. C. Cornelissen 2010. Isotopic analysis of cyanobacterial nitrogen fixation associated with subarctic lichen and bryophyte species. Plant Soil 333:507–517, doi: 10.1007/s11104-010-0374-6 • Online
Holst, T., Arneth, A., Hayward, S., Ekberg, A., Mastepanov, M., Jackowicz-Korczynski, M., Friborg, T., Crill,P.M. & Bäckstrand, K. 2010. BVOC ecosystem flux measurements at a high latitude wetland site. Atmospheric Chemistry and Physics 10: 1617-1634 • Online
Jackowicz-Korczynski, M., Christensen, T.R., Bäckstrand, K., Crill, P., Friborg, T., Mastepanov, M. & Ström, L. 2010. Annual cycle of methane emission from a subarctic peatland. Journal of Geophysical Research, Vol.115, G02009, doi:10.1029/2008JG000913. 10pp • Online
Karlsson, J., Christensen, T.R., Crill, P., Förster, J., Hammarlund, D., Jackowicz-Korczynski, M., Kokfelt, U., Roehm, C. & Rosén, P. 2010. Quantifying the relative importance of lake emissions in the carbon budget of a subarctic catchment. Journal of Geophysical Research Vol 115, G03006, doi: 10.1029/2010JG001305, 2010. • Online
Kokfelt, U., Reuss, N., Struyf, E., Sonesson, M., Rundgren, M., Skog, G., Rosén, P. & Hammarlund, D. 2010. Wetland development, permafrost history and nutrient cycling inferred from late Holocene peat and lake sediment records in subarctic Sweden. J. Paleolimnol. 44: 327-342. • Online
Rydberg, J., Klaminder, J., Rosén, P. & Bindler, R. 2010. Climate driven release of carbon and mercury from permafrost mires increases mercury loading to sub-arctic lakes. Science of the Total Environment 408: 4778-4783. • Online

2009

Aerts, R. 2009. Nitrogen supply effects on leaf dynamics and nutrient input into the soil of plant species in a sub-arctic tundra ecosystem. Polar Biol (2009) 32:207–214. doi: 10.1007/s00300-008-0521-1. • Online
Christensen, T.R., Johansson, T., Olsrud, M., Ström, L., Lindroth, A., Mastepanov, M. Malmer, N., Friborg, Th., Crill, P.M. and Callaghan, T.V. 2009. A catchment scale process study of carbon and greenhouse gas exchange in a subarctic landscape. In: Fronzek, S., Johansson, M., Christensen, T.R., Carter, T.R., Friborg, Th. & Luoto, M. (eds). Climate change impacts on subarctic palsa mires and greenhouse gas feedbacks. Proceedings of the PALSALARM symposium Abisko, Sweden 28-30 October 2008. Reports of Finnish Environment Institute 3:41-43
Crill, P. 2009. Fluxes and budgets, GHG feedbacks of palsa mires. In: Fronzek, S., Johansson, M., Christensen, T.R., Carter, T.R., Friborg, Th. & Luoto, M. (eds) Climate change impacts on sub-arctic palsa mires and greenhouse gas feedbacks. Proceedings of the PALSALARM symposium Abisko, Sweden 28-30 October 2008. Reports of Finnish Environment Institute 3: 27-29 • Online
Friborg, Th., Johansson, T., Jackowicz-Korczynski, M., Christensen, T.R. & Crill, P.M. 2009. Palsa-mires - CO2 exchange from Stordalen mire. In: Fronzek, S., Johansson, M., Christensen, T.R., Carter, T.R., Friborg, Th. & Luoto, M. (eds.). Climate change impacts on sub-arctic palsa mires and greenhouse gas feedbacks. Proceedings of the PALSALARM symposium. Abisko, Sweden 28-30 October 2008. Reports of Finnish Environment Institute 3: 36-40 • Online
Friedman, B., Herich, H., Kammermann, L., Gross, D.S., Arneth, A., Holst, T. & Cziczo, D.J. 2009. Subarctic atmospheric aerosol composition: 1. Ambient aerosol characterization. Journal of Geophysical Research 114, D13203, doi. 10.1029/2009JD011772, 2009 • Online
Fronzek, S., Johansson, M., Christensen, T.R., Carter, T.R., Friborg, Th. & Luoto, M. (eds.). 2009. Climate change impacts on sub-arctic palsa mires and greenhouse gas feedbacks. Proceedings of the PALSALARM symposium. Abisko, Sweden 28-30 October 2008. Reports of Finnish Environment Institute. 3. 74pp • Online
Hammarlund, D. & Kokfelt, U. 2009. A Holocene perspective on palsa mires in northern Fennoscandia with particular focus on Stordalen. In: Fronzek, S., Johansson, M., Christensen, T.R., Carter, T.R., Friborg, Th. & Luoto, M. (eds.). Climate change impacts on sub-arctic palsa mires and greenhouse gas feedbacks. Proceedings of the PALSALARM symposium. Abisko, Sweden 28-30 October 2008. Reports of Finnish Environment Institute 3: 53-55
Jackowicz-Korczynski, M. 2009. Land-atmosphere interactions of a subarctic palsa mire. PhD Thesis. GeoBiosphere Science Centre. Department of Physical Geography and Ecosystems Analysis. Lund University. Meddelanden från Lunds universitets geografiska institution. Avhandling 184. 21pp • Online
Jackowicz-Korczynski, M., Christensen, T.R., Friborg, Th., Crill, P.M. & Ström, L. 2009. CH4 exchange over Stordalen mire by EC technique. In: Fronzek, S., Johansson, M., Christensen, T.R., Carter, T.R., Friborg, Th. & Luoto, M. (eds.). Climate change impacts on sub-arctic palsa mires and greenhouse gas feedbacks. Proceedings of the PALSALARM symposium. Abisko, Sweden 28-30 October 2008. Reports of Finnish Environment 3:32-35 • Online
Johansson, M. 2009. Changing lowland permafrost in northern Sweden: Multiple drivers of past and future changes. PhD Thesis. Geobiosphere Science Centre. Department of Physical Geography and Ecosystem Analysis. Lund University. Meddelanden från Lunds Universitets Geografiska Institution. Avhandlingar 180. 34pp • Online
Kokfelt, U. 2009. Subarctic ecosystem responses to climate, catchment and permafrost dynamics in the Holocene. LUNDQUA Thesis 62. Quaternary Sciences. Department of Geology. GeoBiosphere Science Centre. Lund University. 26pp • Online
Kokfelt, U., Rosén, P., Schoning, K, Christensen, T.R., Förster, J., Karlsson, J., Reuss, N., Rundgren, M., Callaghan, T.V., Jonasson, Ch., & Hammarlund, D. 2009. Ecosystem responses to increased precipitation and permafrost decay in subarctic Sweden inferred from peat and lake sediments. Global Change Biology 15(7): 1652-1663, doi:10.1111/j.1365-2486.2009.01880.x. • Online
Kokfelt, U., Struyf, E. & Randsalu, L. 2009. Diatoms in peat - Dominant producers in a changing environment? Short communication. Soil Biology & Biochemistry 41: 1764-1766 • Online
Olsrud, M. & Michelsen, A. 2009. Effects of shading on photosynthesis, plant organic nitrogen uptake, and root fungal colonization in a subarctic mire ecosystem. Botany 87: 463-474 • Online
Stark, H. 2009. Isoprene (C5H8) emission dynamics of a sub-arctic mire landscape and the influence of site, vegetation, net carbon dioxide (CO2) exchange, and micrometeorology Diplomarbeit. Inst. für Bodenkunde und Standortslehre. Fakultät Forst-, Geo- & Hydrowissenschaften. Technische Universität Dresden. 109pp.

2008

Bäckstrand, K. 2008. Carbon gas biogeochemistry of a northern peatland - in a dynamic permafrost landscape. PhD Thesis. Stockholms universitets inst. f geologi & geokemi. Meddelande No. 333. 32pp • Online
Bäckstrand. K. 2008. A Review: Fifty years of research at the subarctic Stordalen mire, northern Sweden. PDF. In: Bäckstrand, K. 2008. Carbon gas biogeo- chemistry of a northern peatland - in a dynamic permafrost landscape. PhD Thesis. Department of Geology and geochemistry, Stockholm University. 13pp. • Online
Bäckstrand, K., Crill, P.M., Mastepanov, M., Christensen, T.R. & Bastviken, D. 2008. Nonmethane volatile organic compound flux from a subarctic mire in Northern Sweden. Tellus B 60(2): 226-237. • Online
Bäckstrand, K., Crill, P.M., Mastepanov, M., Christensen, T.R. & Bastviken, D. 2008. Total hydrocarbon flux dynamics at a subarctic mire in northern Sweden. J. Geophysical Research 113, G03026, doi:10.1029/2008JG000703. 16pp. • Online
Klaminder, J., Yoo, K., Rydberg, J. & Gielser, R. 2008. An explorative study of mercury export from a thawing palsa mire. Journal of Geophysical Research 113, G04034, doi: 10.1029/2008JG000776. • Online
Petrescu, A.M. R.J. van Huissteden, M. Jackowicz-Korczynski, A. Yurova, T.R. Christensen, P.M. Crill, K. Bäckstrand and T.C. Maximov (2008). Modelling CH4 emissions from arctic wetlands: effects of hydrological parameterization. Biogeosciences, 5: 111–121. • Online
Åkerman, H.J. & Johansson, M. 2008. Thawing permafrost and thicker active layers in Subarctic Sweden. Permafrost and Periglacial Processes 19(3): 279-292, doi:10.1002/ppp.626 • Online

2007

Christensen, T.R. & Johansson, T. 2007. Stordalen: Vetenskapshistorisk lokal. Miljö-forskning 1: 32-33.
Christensen, T.R., Johansson, T., Olsrud, M., Ström, L., Lindroth, A., Mastepanov, M. Malmer, N., Friborg, T., Crill, P. & Callaghan, T.V. 2007. A catchment-scale carbon and greenhouse gas budget of a subarctic landscape. Phil. Trans.R.Soc. A. 365: 1643-1656. • Online
Ström, L. & Christensen, T.R. 2007. Below ground carbon turnover and greenhouse gas exchanges in a sub-arctic wetland. Soil Biology and Biochemistry 39: 1689-1698. • Online

2006

Johansson, M., Christensen, T.R., Akerman, H.J. & Callaghan, T.V. 2006. What Determines the Current Presence or Absence of Permafrost in the Torneträsk Region, a Sub-arctic Landscape in Northern Sweden? Ambio 35(4): 190-197. • Online
Johansson, T. 2006. Temporal and spatial variability of carbon cycling in a subarctic landscape. PhD thesis. Geobiosfärvetenskap inriktning naturgeografi och ekosystemanalys. Meddelanden från Lunds universitets geografiska institution. Avhandlingar 166. Lund. 29pp • Online
Johansson, T., Malmer, N., Crill, P.M., Friborg, Th., Åkerman, J.H., Mastepanov, M. & Christensen, T.R. 2006. Decadal vegetation changes in a northern peatland, green-house gas fluxes and net radiation forcing. Global Change Biology 12(12): 2352-2369. • Online

2005

Malmer, N., Johansson, T., Olsrud, M. & Christensen, T.R. 2005. Vegetation, climate changes and net carbon sequestration in a North-Scandinavian subarctic mire over 30 years. Global Change Biology 11: 1895-1909. • Online

2004

Aerts, R., Cornelissen, J. H. C., Dorrepaal, E., van Logtestijn, R. S. P., & Callaghan, T. V. (2004). Effects of experimentally imposed climate scenarios on flowering phenology and flower production of subarctic bog species. Global Change Biology, 10(9), 1599–1609. • Online
Christensen, T.R., Johansson, T., Åkerman, H.J., Mastepanov, M., Malmer, N., Friborg, T., Crill, P. & Svensson, B.H. 2004. Thawing sub-arctic permafrost: Effects on vegetation and methane emissions. Geophysical Research Letters, Vol 31(60): 1-4 • Online
Dorrepaal, E., Aerts, R., Cornelissen, J. H. C., Callaghan, T. V., & van Logtestijn, R. S. P. (2004). Summer warming and increased winter snow cover affect Sphagnum fuscum growth, structure and production in a sub-arctic bog. Global Change Biology, 10(1), 93–104. • Online
Olsrud, M. 2004. Mechanisms of below-ground carbon cycling in subarctic ecosystems. PhD thesis. GeoBiosphere Science Centre. Physical Geography and Ecosystems Analysis. Lund University, Sweden. Meddelanden från Lunds Universitets Geografiska Institutioner. Avhandlingar. Nr 155. 36pp • Online
Olsrud, M. & Christensen, T.R. 2004. Carbon cycling in subarctic tundra: seasonal variation in ecosystem partitioning based on in situ 14C pulse-labelling. Soil Biology & Biochemistry 36: 245-253 • Online
Olsrud, M., Melillo, J.M., Christensen, T.R., Michelsen, A., Wallander, H. & Olsson, P.A. 2004. Response of ericoid mycorrhizal colonization and functioning to global change factors. New Phytologist 162: 459-469 • Online
Ström, L. & Christensen, T. R. 2004. Myrens växter styr växthuseffekten. Svensk Botanisk Tidskrift 98 (6): 313-316.

2002

Christensen, T.R., Lloyd, D., Svensson, B., Martikainen, P.J., Harding, R., Oskarsson, H., Friborg, T., Soegaard, H. & Panikov, N. 2002. Biogenic controls on trace gas fluxes in northern wetlands. Global Change NewsLetter 51: 9-11, 14-15.
Öquist, M. G., and B. H. Svensson, 2002. Vascular plants as regulators of methane emissions from a subarctic mire ecosystem, J. Geophys. Res., 107(D21), 4580, doi:10.1029/2001JD001030. • Online
Sonesson, M., Carlsson, B.Å., Callaghan, T.V., Halling, S., Björn, L.O., Bertgren, M. & Johanson, U. 2002. Growth of two peat-forming mosses in subarctic mires: species interactions and effects of simulated climate change. Oikos 99 (1): 151-160. • Online

2001

Aerts, R., Wallén, B., Malmer, N. & Caluwe, H.de. 2001. Nutritional constraints on Sphagnum growth and potential decay in northern peatlands. Journal of Ecology 89 (2): 292-299. • Online

1999

Christensen, T.R. 1999. Potential and actual trace gas fluxes in Arctic terrestrial ecosystems. Polar Research 18(2): 199-206. • Online
Shaver, G.R. & Jonasson, S. 1999. Response of Arctic ecosystems to climate change: results of long-term field experiments in Sweden and Alaska. Polar Research 18(2): 245-252. • Online
Svensson, B.H., Christensen, T.R., Johansson, E. & Öquist, M. 1999. Interdecadal changes in CO2 and Ch4 fluxes of a subarctic mire: Stordalen revisited after 20 years. Oikos 85(1): 22-30. • Online

1998

Christensen, T.R., Jonasson, S., Michelsen, A., Havström, M. & Callaghan, T.V. 1998. Environmental controls on soil respiration in the Eurasian and Greenlandic Arctic. Journal of Geophysical Research 103: 15-29. • Online
Dahlberg, U., Bergstedt, J. & Pettersson, A. 1998. Fältinstruktion för, och erfarenhet från vegetationsinventering i Abisko, sommaren 1997. Sveriges Lantbruksuniversitet, Umeå, Arbetsrapport 32: 37s.

1996

Berglund, B.E., Barnekow, L., Hammarlund, D., Sandgren, P. & Snowball, I.F. 1996. Holocene forest dynamics and climate change in the Abisko area, northern Sweden - the Sonesson model of vegetation history reconsidered and confirmed. Ecological Bulletins 45: 15-30. • Online
Jonasson, S., Lee, J.A., Callaghan, T.V., Havström, M. & Parsons, A.N. 1996. Direct and indirect effects of increasing temperatures on subarctic ecosystems. Ecological Bulletins 45: 180-191. • Online
Jonasson, S. & Michelsen, A. 1996. Nutrient cycling in subarctic and arctic ecosystems, with special reference to the Abisko and Torneträsk region. Ecological Bulletins 45: 45-52. • Online
Karlsson, P.S. & Callaghan, T.V. (Eds). 1996. Plant ecology in the subarctic Swedish Lapland. Ecological Bulletins 45, 227 pp. • Online
Malmer, N. & Wallén, B. 1996. Peat formation and mass balance in subarctic ombrotrophic peatlands around Abisko, northern Scandinavia. Ecological Bulletins 45: 79-92. • Online

1992

Aerts, R., Wallén, B. & Malmer, N. 1992. Growth-limiting nutrients in Sphagnum-dominated bogs subject to low and high atmospheric nitrogen supply. Journal of Ecology 80(1): 131-140. • Online
Sonesson, M., Gehrke, C. & Tjus, M. 1992. CO2 environment, microclimate and photosynthetic characteristics of the moss Hylocomium splendens in a subarctic habitat. Oecologia 92: 23-29. • Online
Wallén, B. 1992. Methods for studying below-ground production in mire ecosystems. Suo 43(4-5): 155-162. • Online

1988

Malmer, N. 1988. Patterns in the growth and the accumulation of inorganic constituents in the Sphagnum cover on ombrotrophic bogs in Scandinavia. Oikos 53(1): 105-120. • Online

1986

Malmer, N. & Wallén, B. 1986. Inorganic elements above and below ground in dwarf shrubs on a subarctic peat bog. Oikos 46(2): 200-206. • Online
Wallén, B. 1986. Above and below ground dry mass of the three main vascular plants on hummocks on a subarctic peat bog. Oikos 46(1): 51-56. • Online

1984

Malmer, N. & Holm, E. 1984. Variation in the C/N-quotient of peat in relation to decomposition rate and age determination with 210Pb. Oikos 43(2): 171-182. • Online
Svensson, B.H. 1984. Different temperature optima for methane formation when enrichments from acid peat are supplemented with acetate or hydrogen. Applied and Environmental Microbiology 48(2): 389-394. • Online
Svensson, B.H. & Rosswall, T. 1984. In situ methane production from acid peat in plant communities with different moisture regimes in a subarctic mire. Oikos: 43:341-350. • Online

1981

Karlsson, P.S. & Sveinbjörnsson, B. 1981. Methodological comparison of photosynthetic rates measured by the 14CO2 technique or infrared gas analysis. Photosynthetica 15(4): 447-452. • Online

1980

Johansson, L. -G. 1980. Photosynthesis of Sphagnum in different microhabitats on a subarctic mire. Ecological Bulletins 30: 181-190. • Online
Kvillner, E. & Sonesson, M. 1980. Plant distribution and environment of a subarctic mire. Ecological Bulletins 30: 97-111. • Online
Malmer, N. & Nihlgård, B. 1980. Supply and transport of mineral nutrients in a subarctic mire. Ecological Bulletins 30: 63-95. • Online
Rosswall, T. & Granhall, U. 1980. Nitrogen cycling in a subarctic ombrotrophic mire. Ecological Bulletins 30: 209-234. • Online
Sonesson, M. (Ed.). 1980. Ecology of a Subarctic Mire. Ecological Bulletins 30: 313 pp. • Online
Sonesson, M. 1980. Klimatet och skogsgränsen i Abisko. Fauna och flora 75(1): 8-11. • Online
Sonesson, M. & Bergman, H. 1980. Area-harvesting as a method of estimating phytomass changes in a tundra mire. Ecological Bulletins 30: 127-137. • Online
Sonesson, M., Jonsson, S., Rosswall, T. & Rydén, B.E. 1980. The Swedish IBP/PT Tundra Biome Project. Objectives - planning - site. Ecological Bulletins 30: 7-25. • Online
Sonesson, M. & Kvillner, E. 1980. Plant communities of the Stordalen mire - A comparison between numerical and non-numerical classification methods. Ecological Bulletins 30: 113-125. • Online
Sonesson, M., Persson, S., Basilier, K. & Stenström, T.-A. 1980. Growth of Sphagnum riparium Ångstr. in relation to some environmental factors in the Stordalen mire. Ecological Bulletins 30: 191-207. • Online
Svensson, B.H. 1980. Energy flow through the subarctic mire at Stordalen. Ecological Bulletins 30: 283-302. • Online
Rydén, B.E. & Kostov, L. 1980. Thawing and freezing in tundra soils. Ecological Bulletins 30: 251-281. • Online
Rydén, B.E., Kostov, L. & Fors, L. 1980. Physical properties of the tundra soil-water system at Stordalen, Abisko. Ecological Bulletins 30: 27-54. • Online
Rydén, B.E. 1980. Climatic representativeness of a project period - epilogue of a tundra study. Ecological Bulletins 30: 55-62. • Online
Svensson, B.H. 1980. Carbon dioxide and methane fluxes from the ombrotrophic parts of a Subarctic mire. Ecological Bulletins 30: 235-250. • Online

1979

Sonesson, M. 1979. Abisko Scientific Research Station: Environment and Research. Holarctic Ecology 2: 279-283. • Online

1978

Basilier, K. & Granhall, U. 1978. Nitrogen fixation in wet minerotrophic moss communities of a subarctic mire. Oikos 31: 236-246. • Online

1977

Klemedtsson, L., Svensson, B.H., Lindberg, T. & Rosswall, T. 1977. The use of acetylene inhibition of nitrous oxide reductase in quantifying denitrification. Swedish Journal of Agricultureal Research 7: 179-185. • Online
Rydén, B.E. & Kostov, L. 1977. Ground water and the water- frost cycle in a tundra mire. Striae 4: 17-19. • Online

1976

Svensson, B.H. 1976. Methane Production in Tundra Peat. In:Microbial production and utilization of gases. Akademie der Wissenschaften zu Göttingen 1976: 135-139 Göttingen

1975

Hinneri, S., Sonesson, M. & Veum, A.K. 1975. Soils of Fennoscandian IBP Tundra Ecosystems. Ecological Studies 16(1): 31-40. • Online
Rosswall, T., Flower-Ellis, J.G.K., Johansson, L. -G., Jonsson, S., Rydén, B.E. & Sonesson, M. 1975. Stordalen (Abisko), Sweden. Ecological Bulletins 20: 265-294. • Online
Rosswall, T. & Heal, O.W. (Eds). 1975. Structure and function of tundra ecosystems. Papers presented at the IBP Tundra Biome V. Int Meeting in Biological Productivity of Tundra, Abisko, Sweden. Ecological Bulletins 20: 450 pp. • Online
Svensson, B.H., Veum, A.K. & Kjelvik, S. 1975. Carbon losses from tundra soils. In: Wielgolaski, F.E. (Ed) Fennoscandian Tundra Ecosystems. Ecological Studies 16: 279-286. • Online

1974

Clarholm, M. 1974. Direct counts of bacteria in tundra peat for estimating generation time and biomass production. Swedish IBP Tundra Biome Project, Technical Report 16: 43-56.
Johansson, L. -G. 1974. Photosynthetic rates of some vascular plants on a subarctic mire at Stordalen. Swedish IBP Tundra Biome Project, Technical Report 16: 145-156. Lund.
Johansson, L. -G. 1974. The distribution and fate of 14C photoassimilates. Swedish IBP Tundra Biome Project, Technical Report 16: 165-172. Lund.
Johansson, L. -G. 1974. Chlorophyll content of four species of vascular plant at Stordalen. Swedish IBP Tundra Biome Project, Technical Report 16: 157-164 Lund.
Madsen, I.-L. & Widell, S. 1974. A vegetation map of the Stordalen site. Swedish IBP Tundra Biome Project, Technical Report 16: 3-15. Lund.
Rheinberg, P. 1974. Microfungal studies at Stordalen and Njulla 1973 - A summary. Swedish IBP Tundra Biome Project, Technical Report 16: 81-82.
Rosswall, T. 1974. Decomposition of plant litter at Stordalen. Swedish IBP Tundra Biome Project, Technical Report 16: 207-212.
Rosswall, T., Berg, B. & Lundkvist, H. 1974. Use of cellulose in field decomposition experiments. Swedish IBP Tundra Biome Project, Technical Report 16: 109-122.
Rosswall, T. & Geidnert, S. 1974. The influence of temperature and moisture on nitrogen mineralisation in peat. Swedish IBP Tundra Biome Project, Technical Report 16: 35-42.
Rosswall, T. & Svensson, B.H. 1974. Chemolithotrophic and photosynthetic bacteria at Stordalen. Swedish IBP Tundra Biome Project, Technical Report 16: 73-80 Lund.
Rydén, B.E. 1974. Bryophyte growth on a tundra mire in relation to radiant energy and water temperature. Swedish IBP Tundra Biome Project, Technical Report 16: 173-184.
Rydén, B.E. 1974. Abiotic studies, Stordalen 1973. Swedish IBP Tundra Biome Project, Technical Report 16: 185-202.
Sonesson, M. 1974. Late Quaternary forest development of the Torneträsk area, North Sweden. 2. Pollen analytical evidence. Oikos 25: 288-307. • Online
Sonesson, M. & Johansson, S. 1974. Bryophyte Growth, Stordalen 1973. Swedish IBP Tundra Biome Project, Technical Report 16: 17-28
Svensson, B.H. 1974. Production of methane and carbon dioxide from a subarctic mire. Swedish IBP Tundra Biome Project, Technical Report 16: 123-144 Lund.

1973

Basilier, K. 1973. Investigations on nitrogen fixation in moss communities. Swedish IBP Tundra Biome Project, Technical Report 16: 83-95.
Clarholm, M. & Rosswall, T. 1973. A comparison of bacterial populations from four different tundra sites by means of a multi-point technique. Swedish IBP Tundra Biome Project, Technical Report 10: 32 pp Uppsala.
Hayes, A.J. 1973. Studies in the microfungi occurring at Stordalen and Njulla, 1972. Swedish IBP Tundra Biome Project, Technical Report 15: 22 pp.
Rydén, B.E. 1973. Radiant energy and water temperature in relation to bryophyte growth within a tundra mire. Proc. of the 24th Alaskan Science Conference Climate of the Arctic, Alaska 1973: 6 pp Uppsala.

1972

Schuer, H. & Modig, P.-H. 1972. Växtkemiska studier. Stordalen, augusti (1972). Univ. Lund, Dept. of Plant Ecology. 20 p-arbete., 15 pp Lund.

1970

Bergman, H., Jonsson, S., Rosswall, T. & Sonesson, M. 1970. The Swedish Tundra Biome Project. A presentation. Swedish IBP Tundra Biome Project, Technical Report 1: 19 pp Lund
Sonesson, M. 1970. Studies on mire vegetation in the Torneträsk area, northern Sweden. IV. Some habitat conditions of the poor mire. Botaniska Notiser 123: 67-111. • Online
Sonesson, M. 1970. Studies on mire vegetation in the Torneträsk area, Northern Sweden. III. Communities of the poor mire. Opera Botanica 26: 120 pp. • Online
Sonesson, M. 1970. Ecologic Studies on poor Mire Vegetation in the Torneträsk Area, Northern Sweden. PhD thesis, Univ. Lund, Lund, Sweden, 6 pp. (A) • Online

1969

Sonesson, M. 1969. Studies on mire vegetation in the Torneträsk area, northern Sweden. II. Winter conditions of the poor mire. Botaniska Notiser 122: 481-511. • Online

1968

Sonesson, M. 1968. Pollen zones at Abisko, Torne lappmark, Sweden. Botaniska Notiser 121: 491-500. • Online

1967

Sonesson, M. 1967. Studies on mire vegetation in the Torneträsk area, northern Sweden. I. Regional aspects. Botaniska Notiser 120: 272-296. • Online

1965

Forsgren, B. 1965. Några palsmyrar i Torne lappmark ur ekologisk och floristisk synpunkt. Univ. Stockholm, Department of Botany, 164 pp Stockholm. • Online

1962

Persson, Å. 1962. Mire and spring vegetation in an area North of Lake Torneträsk. II. Habitat conditions. Opera Botanica 6(3): 1-100. • Online

1961

Persson, Å. 1961. Mire and spring vegetation in an area North of Lake Torneträsk. I. Description of vegetation. Opera Botanica 6(1): 1-187. • Online

1952

Hedberg, O. 1952. Vegetation. In: Botanical investigations in the Pältsa region of northernmost Sweden. Chapter 3. Botaniska Notiser 3(2): 45-73. Lund.

1951

Avery, G.S. Jr. 1951. Lappland - Magnificent and Strangely Interesting. Brooklyn Botanic Garden Record. Plants & Gardens. New Series 7(2): 76-83. • Online

1950

Du Rietz, G.E. 1950. Phytogeographical Excursion to the Surroundings of Lake Torneträsk in Torne Lappmark (Northern Sweden) July 2l - August 2, 1950. Seventh Int. Bot. Congress, Sthlm 1950. Excursion Guides, C III c, Section: PHG: 19 pp Uppsala. • Online

1946

Schytt, V. 1946. Namnformerna på den nya turistkartan över området Abisko-Riksgränsen. Till Fjälls 18: 66-68. • Online

1912

Andersson, G. & Birger, S. 1912. Den norrländska florans geografiska fördelning och invandringshistoria med särskild hänsyn till dess sydskandinaviska arter. Norrländskt Handbibliotek 5: 416 pp Uppsala. • Online